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Cannot Run Mixed C/fortran Code

Error configuring R. which gfortran returns /cm/shared/apps/gcc/4.8.2/bin/gfortran. lower case, underscore, extra underscorechecking whether g77 appends underscores to external names... Converting the weight of a potato into a letter grade If I receive written permission to use content from a paper without citing, is it plagiarism?

Free forum by Nabble Edit this page R › R help Search everywhere only in this topic Advanced Search Installation on 64bit redhat linux question ‹ Previous Topic Next Topic › configure: WARNING: cannot run mixed C/Fortran code configure: error: Maybe check LDFLAGS for paths to Fortran libraries? Paul Hiemstra Department of Physical Geography Faculty of Geosciences University of Utrecht Heidelberglaan 2 P.O. Would we find alien music meaningful? http://stackoverflow.com/questions/25033951/problems-installing-r3-1-1-on-linux-centos-release-6-5-check-ldflags-for-paths

You need it in the run library path, not just the link library path.So you could put-L/opt/lang/gcc-g77-3.3.2/lib -R/opt/lang/gcc-g77-3.3.2/libin LDFLAGS.(Maybe that's an autoconfissue. It seems to be located here on my machine "/usr/lib/gcc/x86_64-redhat-linux/3.4.6/". So you could put -L/opt/lang/gcc-g77-3.3.2/lib -R/opt/lang/gcc-g77-3.3.2/lib in LDFLAGS.

Cheers, Kjell Here is the configure output from 'port -v configure': <...> checking whether we can compute C Make dependencies... Are there continuous functions for which the epsilon-delta property doesn't hold? Is it ethical for a journal to cancel an accepted review request when they have obtained sufficient number of reviews to make a decision? Could be.

Installing R-2.15.1 source package on Ubuntu 12.04... ► September (1) ► July (1) ► June (2) Search This Blog Labels Genomics (1) HowTos (3) Installation (2) Linux (3) NGS (1) R Hopefully someone can help me. >> >> Regards >> > > > Maybe install "libcnf-dev" ( a library for C and Fortran mixed > programming ) and try again lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... https://trac.sagemath.org/ticket/7865 no configure: error: --with-readline=yes (default) and headers/libs are not available #./configure --with-readline=noi get this error checking whether f77 appends extra underscores to external names...

Should I allow my child to make an alternate meal if they do not like anything served at mealtime? Box 80.115 3508 TC Utrecht Phone: +3130 274 3113 Mon-Tue Phone: +3130 253 5773 Wed-Fri http://intamap.geo.uu.nl/~paul______________________________________________ [hidden email] mailing list https://stat.ethz.ch/mailman/listinfo/r-helpPLEASE do read the posting guide http://www.R-project.org/posting-guide.htmland provide commented, minimal, self-contained, I see link lines like this: gcc -o conftest -g -O2 -I/usr/local/include Skip Montanaro at Apr 30, 2004 at 1:52 pm ⇧ Brian> There is one, and it told you, `check I saw Without an extract from the log it is hard for us to comment. > no obvious configure options which would allow me to worm around this > problem.

Examining the config.log file gave me this information: configure:28519: checking whether mixed C/Fortran code can be run ./conftest: error while loading shared libraries: libgfortran.so.3: cannot open shared object file: No such http://r.789695.n4.nabble.com/compiling-R-2-9-2-or-R-2-10-0-on-ubuntu-9-04-powerpc-td908558.html If that does not help, try to find more details in the config.log (or similar) file to find out what does the configure actually try to do in that check. yeschecking how to get verbose linking output from g77... -vchecking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2 -L/usr/ccs/bin -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_schecking for dummy main to link with configure: WARNING: cannot run mixed C/Fortran code configure: error: Maybe check LDFLAGS for paths to Fortran libraries? <...> And here is the same output when I run configure by hand: <...>

yes checking whether /MacPorts/bin/llvm-gfortran-4.2 appends extra underscores to external names... configure: WARNING: cannot run mixed C/Fortran code configure: error: Maybe check LDFLAGS for paths to Fortran libraries? I sawno obvious configure options which would allow me to worm around thisproblem.My environment is:Solaris 9 on Intelgcc and g77 3.3.2Any suggestions to help get this beast built would be greatly Given thatthat's within the g77 tree and presumably that tree is structured in aconsistent manner, wouldn't it make sense for configure to also add"-L/opt/lang/gcc-g77-3.3.2/lib" to the link line? (Maybe that's an

yes checking size of long... 8 checking for long long... I poked around a little bit but I'm really a beginner when it comes to debugging things like this. configure: WARNING: > cannot run mixed C/Fortran code > configure: error: Maybe check LDFLAGS for paths to Fortran libraries? > > > i have installed: > libg2-dev > libg2c0 > libx11-dev yes > checking how to get verbose linking output from g77... -v > checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2 -L/usr/ccs/bin -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s > checking

If I run the configure command from my first email by hand everything works. more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed The error message from running ./configure in the R source directory: checking whether mixed C/Fortran code can be run...

nonechecking for Fortran name-mangling scheme...

Ripley, ripley at stats.ox.ac.ukProfessor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/University of Oxford, Tel: +44 1865 272861 (self)1 South Parks Road, +44 1865 272866 (PA)Oxford OX1 3TG, UK Fax: +44 1865 272595 reply | I set export LDFLAGS=" -L/cm/shared/apps/gcc/4.8.2/lib64 -L/cm/shared/apps/gcc/4.8.2/lib -lgfortran " and it works now ! Download in other formats: Comma-delimited Text Tab-delimited Text RSS Feed Powered by Trac 1.1.6 By Edgewall Software. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44

Hopefully someone can help me. > > Regards > > -- > View this message in context: http://old.nabble.com/compiling-R-2.9.2-or-R-2.10.0-on-ubuntu-9.04-%28powerpc%29-tp26208637p26208637.html> Sent from the R help mailing list archive at Nabble.com. > > ______________________________________________ So I'm wondering if this is what is wrong and how I can make the configure script "see" the directory with this file, I'm a Linux newbie by the way so Using the pre-built RPMs would be the easier path to take, unless you have a specific requirement for compiling R from source code. I finally got around to installing MacPorts from trunk and trying configure.compiler macports-llvm-gcc-4.2 It uses -m64 which gets me past the first problem.

Free forum by Nabble Edit this page Things Of Some Value Notes on things I would like to remember Home About Me PhD Thesis 64bit Libraries January 11, 2010 I was yes checking whether /MacPorts/bin/llvm-gfortran-4.2 and /MacPorts/bin/llvm-gcc-4.2 -std=gnu99 agree on double complex... Given thatthat's within the g77 tree and presumably that tree is structured in aconsistent manner, wouldn't it make sense for configure to also add"-L/opt/lang/gcc-g77-3.3.2/lib" to the link line?No. yes checking size of double... 8 checking for long double...

Who plays Penk in ‘Tsunkatse’? Work issues: Branch: Commit: Dependencies: Stopgaps: Description Build environment Sun Ultra 27 3.333 GHz Intel Xeon. 12 GB RAM OpenSolaris 2009.06 snv_111b X86 Sage 4.3.1.alpha1 (with a few packages hacked to yes > checking whether gfortran appends extra underscores to external names... yes, using /MacPorts/bin/llvm-gcc-4.2 -std=gnu99 -MM checking whether /MacPorts/bin/llvm-gcc-4.2 -std=gnu99 supports -c -o FILE.lo...

There is one, and it told you, `check LDFLAGS for paths to Fortran libraries'. no > configure: error: --with-readline=yes (default) and headers/libs are not > available > > #./configure --with-readline=no > i get this error > checking whether f77 appends extra underscores to external names... The file config.log just stops after #define HAVE_F77_UNDERSCORE 1 –Pierre Jul 30 '14 at 10:52 It is strange that gfortran reports version 4.8.2 but the libraries are 4.4.4. Your article helped me a lot.

Try running the locate command for libgfortran. –Vladimir F Jul 30 '14 at 11:00 nice finding, I pressed Ctrl-C too early after my 'find': there is another lib under I did not knew the build-dep option. yes checking whether /MacPorts/bin/llvm-gfortran-4.2 appends extra underscores to external names... yes checking how to get verbose linking output from /MacPorts/bin/llvm-gfortran-4.2...

nonechecking for Fortran name-mangling scheme... no checking whether mixed C/Fortran code can be run... yes, using $(CC) -MM checking whether gcc -std=gnu99 supports -c -o FILE.lo...