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Cannot Run In Pe Because It Only Offers 0 Slots

FAIR USE NOTICE This site contains copyrighted material the use of which has not always been specifically authorized by the copyright owner. permalinkembedsaveparentgive gold[–]Olosta_ 0 points1 point2 points 9 months ago(1 child)Didn't use SGE or derivative for a long time, which fork is popular these days? queue instance " 'user name'@'node'.crc.nd.edu" dropped because it is full job dropped because of user limitations will appear at the bottom of a qstat -j output. Strength check between medium size and large size Draw a hollow square of # with given width My cat sat down on my laptop, now the right side of my keyboard

This site is perfectly usable without Javascript. The site contain some broken links as it develops like a living tree... share|improve this answer answered Oct 29 '13 at 8:58 William Hay 31615 add a comment| Your Answer draft saved draft discarded Sign up or log in Sign up using Google I was tempted to look for some global value for PE slots but that seems a bit ridiculous.

visit: CRC SGE Environment for more in-depth information Retrieved from "http://wiki.crc.nd.edu/wiki/index.php/Why_is_my_job_waiting_in_the_queue"

[email protected] Discussion: [gridengine users] cannot run in PE ... I currently have 4 serial job queues (debug.q, shortserial.q, medserial.q, longserial.q) and 1 parallel job queue (shortparallel.q). Also, I'd like to add the fact that I did ensure that any error states on hosts with PE mpi.p4 were cleared, in case anyone is wondering. ... Multiple types of probes increase this period.

That's means we need to install gridengine-client Code: #apt-get install gridengine-client Adv Reply Quick Navigation Server Platforms Top Site Areas Settings Private Messages Subscriptions Who's Online Search Forums Forums Home Fowler Ave. what happened with the gridengine ? A server with 8 cores will not accept mpi-12 requests.

Hi all, We're on GridEngine 6.0-u8 (yeah, i know, but we'll be upgrading to 6.1 in the next couple of weeks). load_avg arch states --------------------------------------------------------------------------------- test.q at compute-0-24.local BIP 0/0/8 0.13 linux-x64 --------------------------------------------------------------------------------- test.q at compute-0-37.local BIP 0/0/8 0.00 linux-x64 ############################################################################ - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING Perhaps someone can shed some light. http://wiki.crc.nd.edu/wiki/index.php/Why_is_my_job_waiting_in_the_queue We are making such material available in our efforts to advance understanding of environmental, political, human rights, economic, democracy, scientific, and social justice issues, etc.

Smith HPC Systems Administrator Research Computing, University of South Florida 4202 E. share|improve this answer answered Nov 24 '11 at 9:30 Jimmy Hedman 1555 The above statement is untrue. What am i missing?qconf -mq long1slots 8but in this case, the program executes his 8 threads on the same host, that's not what i want;thanks in advance for help,gerard_______________________________________________users mailing listhttps://gridengine.org/mailman/listinfo/users I have a lot of jobs running on the cluster I admin that demonstrate this. –William Hay Oct 29 '13 at 8:54 It could be one or many hosts,

Did I miss something obvious? http://arc.liv.ac.uk/pipermail/gridengine-users/2008-June/019483.html So, running 8 threads in SMP isn't possible in your configuration as you have only 4 per machine. Thanks, Brian Smith -- Brian R. There are enough slots on the queue to satisfy the job, but the scheduler claims that there aren't enough provided by the PE.

When this job is submitted, it sits in the queue and qstat -j reports [[email protected] ~]# qstat -j ============================================================== job_number: 41428 exec_file: job_scripts/41428 submission_time: Thu Aug 2 11:16:25 2007 ... Hi all, We're on GridEngine 6.0-u8 (yeah, i know, but we'll be upgrading to 6.1 in the next couple of weeks). You will need for example an MPI library to compute across machines.exactly what i missed! Is this a bug that was corrected in a later release?

Not the answer you're looking for? My test job is the mpihello program. In accordance with Title 17 U.S.C. Result is that scheduler decides not to assign the job as to prevent that smp.8.q goes in load alarm state afterwards.

In combination with sched_conf(5) job_load_adjustments this could cause high hypothetical load for this 8-way job. Usually that is the cause. load_avg arch states --------------------------------------------------------------------------------- [email protected] BIP 0/0/12 -NA- lx26-amd64 au --------------------------------------------------------------------------------- [email protected] BIP 0/0/12 -NA- lx26-amd64 au --------------------------------------------------------------------------------- [email protected] BIP 0/0/12 -NA- lx26-amd64 au --------------------------------------------------------------------------------- [email protected] BIP 0/0/12 -NA- lx26-amd64 au

When use parallel environment, the client node need to have thr right to use qrsh.

cannot run in PE "mpi-8"/etc because it only offers 8 slots You request x amount of cores, for example 32, and a qstat -j command returns the line shown above in However, when I submit a job that uses 4 threads with e.g. All an allocation_rule of $pe_slots does is force all requested slots to be allocated on a single host. What am i missing?

The queue for this box has been configured to support the parallel environment mpi.p4 as we see here: [[email protected] ~]# qconf -sq smp.8.q | grep pe_list pe_list mpi.shm mpi.p4 ompi.tcp ompi more hot questions question feed about us tour help blog chat data legal privacy policy work here advertising info mobile contact us feedback Technology Life / Arts Culture / Recreation Science All three nodes have two quad-core CPUs. The queue in question is configured thus (server names changed): qname all.q hostlist @allhosts seq_no 0 load_thresholds np_load_avg=1.75 suspend_thresholds NONE nsuspend 1 suspend_interval 00:05:00 priority 0 min_cpu_interval 00:05:00 processors UNDEFINED qtype

William Hay 2011-11-18 14:37:30 UTC PermalinkRaw Message Post by Gerard Henryhello all,i got trouble to confgure a queue on SGE 6.2u5 (linux)I have two machines amd64, with this topology: SCCSCC so GBiz is too! Latest News Stories: Docker 1.0Heartbleed Redux: Another Gaping Wound in Web Encryption UncoveredThe Next Circle of Hell: Unpatchable SystemsGit 2.0.0 ReleasedThe Linux Foundation Announces Core Infrastructure Regards, Andreas On Thu, 9 Aug 2007, Brian R. The queue you show only has "make" as a supportedPE.-ChrisPost by Gerard Henryhello all,i got trouble to confgure a queue on SGE 6.2u5 (linux)I have two machines amd64, with this topology:

Roland Boemer Vorsitzender des Aufsichtsrates: Martin Haering Previous Message by Thread: PE Slots Problem I sent this message out when the mailing lists were down so I'm sending it again. I was tempted to look for some global value for PE slots but that seems a bit ridiculous. Its been fairly trouble-free but I've just run into an interesting problem. Typesetting text with math How do pilots identify the taxi path to the runway?

It is possible to define metric spaces from pure topological concepts without the need to define a distance function? So I was requesting all of my nodes ram, as a result, the second job couldnt get on even though the cores were available! because it only offers 0 slots Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] More information about the users mailing list current community blog Nikolai Bezroukov.

The rest will be placed in queue. Join them; it only takes a minute: Sign up Here's how it works: Anybody can ask a question Anybody can answer The best answers are voted up and rise to the When this job is submitted, it sits in the queue and qstat -j reports [[email protected] ~]# qstat -j ============================================================== job_number: 41428 exec_file: job_scripts/41428 submission_time: Thu Aug 2 11:16:25 2007 ... vBulletin 2000 - 2016, Jelsoft Enterprises Ltd.

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The time now is 01:25 PM. Also, I'd like to add the fact that I did ensure that any error states on hosts with PE mpi.p4 were cleared, in case anyone is wondering. ... Any one can help to make the parallel environment work? What am i missing?I also tried to augment the value:qconf -mq long1slots 8but in this case, the program executes his 8 threads on the same host,that's not what i want;thanks in